Oryzias latipes - Rps27a


SpeciesOryzias latipes
Gene NameRps27a
5' Upstream
ttgttattttattttgagtttattccatctaaaacttcttaaataaatacattttaccct
tgattttccgtttttttatgtcaaacatttagacttttgagattttagaaagatttttag
gaaaaaattaactatttatctattgtatgtgtatgtcaaatgaggtatgtgaacaaaagg
ttgtcaaaatttccaaactaaaagaaaaacaatgttttgttgtacttatttagatctata
ttaagatttcctctttcaacaaatataactgtattgatcatttaatactggtttgttgct
gtttaattgttcatggggagaatatgaatcaaatgcaataatacaaaggtttgttgaaat
accttgcagaaaacggtgcggtagaccaagtaacgtagctcgtcggggccctctgctgga
caccccaggtactgtttctcacggtcaataaagtcatacagagatgctaaaagcagcttg
tcgtcctcgcacggaacactaataactgtagatttcatttttccttttttcttgataaac
tttgtaattgtctggacatgttaagattctataacttttacacgagctgacagcctttct
tctgaaagccaaaagacaaatacttgcatcaccatggttacgctttatgttgatttgtta
actcattcactccttctctgttaacgctccgaaattttagttactattgcagttcaatag
ataaaaaacatagggaatagtaattttgcaggacttcacattttatgtttgaaatatatt
tctgatcaggcttcatgacagacacctaatccgtgcaaacgcctcccgaaaaccccgtag
ctcgctggcggaggtcctcttctcgtgatccgccatcaggaacgcgcctgtggtaaggct
agctccgacttttgtcggttttccctcactaaagctaactttttatgtcataaattcatg
tcgattcgagactaaaaatgtcattctattttatggtcag
Exon 1
GTGGATTGAACGCCAGGATGCAGATTTTCGTCAAAACCCTTACGGGGAAGACCATTACCC
TCGAG
Intron 1
gtgcgttcaatgactgcgggtattttcctgtgtgatattaggtctggagctttgtgagtt
aaaataaaagtgccttctgagctacggttacagattcattgggttattcatatgttgctc
cactcataataaaatgtttaatcgtttgagttctcaaactaagtaaaactgaaccggcgc
tggttgaacacgtgtgttggacagcggcgcttccaactggactcacctaagccggcctta
cgttccgagtgtctcccaacctcacgtttatgtttctattgtttgtag
Exon 2
GTTGAGCCTTCTGACACCATCGAAAATGTCAAGGCTAAGATTCAGGACAAAGAAG
Intron 2
gtgagtcccctaagcctcaggtgagggaaaataagttactgccttcctgaatcgcctcga
caggtgacagtgattctggctacgttcacactgcaggctgaaacgacccaattccgaatt
ttttgcccctaagcggcccaattccgatcttttcatgacagtctgaatgacacagatccg
atcttttcaaatgcgacccaggccccgtgggtttgccggcctgattccgaattgtagccg
atcttttcaattgcgaccgccgtctgaccggccaggcgacttgattccgaactgtacgtc
atcgacacgcnnnnnnnnnnaacgtaaacatcataccatggtggacgatgctgctgagat
cagtcagtagaagggaagagaggtcaccgattggattaatatttgggctgatcgctcttt
tcaggccaaactccagggctctgatcgcaactgggcggtttttgaaaaaaattccagata
aatggcagagcgtggtgttgaacctttaccgcgataacttttttttctttctcccctttg
accgtgctcagaagcgcgggggacccaggcaatccccctcctcctcctccctgttctgat
ccttagattctccagaacgggttaataaagagtccatagcatttattttgggggaaacct
tcttttattaccgtcctccgtaacacacaacatgaatgcgcgcccacactgcccccccct
attctctatcgcggcacgcgcttgcacacacgcgggcgcgcggccccagcacatacacat
tcctcttccactacagtgggtacagacgatcccgactccaatgccttcttaaaatgagaa
gattgtaattgtgctgctcctttgtgaaaataaatttaatattacaaaaagagctccgct
tttgacaacactgttgttgacatccattgttaacgttggctccgcaaacgagtgacgtcg
ttcaccgttgagtattcttctggcttctgcgcatgcgggtctcgtttgggtcgtgtcacg
gtcacactggagatcacaaaagttcggatttacttggaaatgtgaacggtctagcaaaca
attcggattttttcaaaaaatccgaattgagcattaagccctgcaggtgaacgtagcctt
agttactgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
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nnnnnnnnnnactcttcatagaacattggtttcgaaataagattatttttgtgtatcaat
tacttaacaaccagggcttacttttaacttatgaggagtttctctctaaatttaacctcc
ctgttccccctttagaatatgctagagtgtttggagcgattccctctggtgtctgcatgc
tgtttaaattccaacacagagttaatattgaggagccttttctactctctccattaatac
tcctgtggggaaaatatgtctgaccggttatcccaggaaaaacaacaaagcaatacgaac
attatttcaaacaaacattgtttcactacctcgtagcatgtcttattggaacatgtttgt
tgaagacattgcatggaaggaggtttggcaaacacccaattaatttttaatcactaataa
ggttaaagaagtttcttttaagattatccatagaatttatccagctaaaatgtttattca
gaacagatttaaattaaacattgacacactctgtagttttggttgtaattcccctgaaac
agttatccatattttttggcattgtcccaaagttaaggtgttttggcagaagatatgtga
ttttattaatgataaaattaattcttgttttgtcttggaaagatgttttgttgggtctaa
tatcaaaaaatatgcaaaaggactctgcttttcttttaaatcttttactaattttggcta
aattccatgttcataaatgtaaattttctggtagaaaaccttgtttcactgtattccttt
ctgaattaagtcagtatatcaacagtattggaaattcagagaagcaaaaagcaatcagaa
cattgtctgtatgtgatagtttcagtattttctcgtagagtttaaccccctggcttattt
ctctctattcttgttcttctgtttgttacagttgtgtatttgatatttgaagttgtgttt
ttattgcatacctaaaaatacgtctttgtaaaatgacataatgtgcaataaagtttatta
aaannnnnnnnnngtttgccgtcctgattccgaattgtagccgttcttttcaattgcaac
cgccgtgtgaccggccaggcgacttgattccgaaccgtacgtcatcgacacgcaacaaac
gtcatcattttgcgttgaagtaggcgggaacgagaacgtaaaaatcaaccatggtggacg
atgctgctgagatcagtcagtggaagggaagggaggtcactgattggattattatttggg
ctgatcgctcttttcaggccaaactccagggctctgatcgcaactgggcggtttttgaaa
aaatttccagataaatggcagagcgtggtgttgaacctttaccgctataacttttttttc
tttctcccctttccgaccgtgctcagaagcgcgggggacccgaggcgatcctcctcctcc
ctgttctgatccttagattctccagaacgggttaataaagagtccatagcatttattctg
ggggaaaccttcttttattaccatcctccgtaacacacaacatgaatgcgcgcccacact
gccccccccctattctctatcgcggcacgcgcttgcacacacgcgggcgcacggccccag
cacatacacattcctcttccactacagtgggtacagacgatcccgactccaatgccttct
taaaatgagaagattgtaattgtgctgctcctttgtgaaaataaatttaatattacaaaa
agagctccgcttttgacaacactgttgttgacatccattgttaacgttggctccgcaaac
gagtgacgtcgttcaccgttgagtattcttctggcttctgcgcatgcgggtctcgtttgg
gtcgtgtcacggtcacactggagatcacaaaagttcggatttacttggaaatgtgaacgg
tctagcaaacaattcggattttttcaaaaaatccgaattgagcattaagccctgcagtgt
gaacgtagcctctgtctactttgaagtggaaaatgtgcttttcaacatttataccggccc
atcatttgagatatttatagttttccttagttggtctaatgttcccagcttcatgtctgc
accatttcactgagtttagaaataatctgtagttattaaaatatttaaaacaaattagct
gttttttttattgatcctaataagcttttatataagtttagtaatgatcatgactgtttg
tatagttgtagaaattcatccacataactaaaaacttctgaatctaacaccttctgagag
gtcttactactgaaagctttcccatagttggagaaaatacttgttgatgtttgaggtcag
acactggttaaaccttttcctaaaaatgaaagaactccttagatttgtggggtttgttgt
ggacttgcgggttagttttgacgggctgctcttgtgtgcag
Exon 3
GAATTCCTCCTGACCAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGACGGCCGCA
CGCTGTCTGACTACAACATCCAGAAG
Intron 3
gtgagctgcaatttgaaggaaaggagggatgcggaagatgatgggttttgtttttgtttg
ccgtttgtaccaaagcttcaatatctttactcactcggaactcgcggatttgtgcacaag
cccaccccccgctctttttgagttcttcattttaaacacctgtgcaatcagacatcacac
gatttgtacgtcatattcatgtacacggctgtttcaacatgtgttaaagacactgctagg
cgcttgtgggagaaccaataatttttctctacttcatcatggaggggattgagggatcag
gtttaatttgttttgaagcagagcagtcgacgtctccacgtgggttcatgagattagaga
ctggtggcagctttgaccggttctgtcgtctctgtgacccggtttgacgacttgctgtcc
cgggattgcagcagtagaaagccgctgttccctctaaccccagtgagagggggctgtaca
gcagcaggggacacagtgaaagaatttgaatttgtaaattctgaaatctcctgcttctct
tcctgttatttttaaacgtttagatttttttttcaaaatgtaagtactaaaaatatattt
tgaagcttttaaaaacatgttgtacatatttatctttgtcctattttttcctttttactt
gaaaaaacggtgacatgatctgaactgtgagtttttgttccgtttcactcttagttaggg
taatgtgctgtctaaaaatgtgcctttatgaaaatgacaggcttgttctgatggttctgt
tcaacaacttaattattaattgaatcttcatcttttttatttggccatttactgaggaaa
aatcaaaatatagggagtttcctaaaagttcagcagttttggctaaaatccctttaagcg
gttattgagaagtttggatccatttttgatctgagcttttgttaaacgaaggggcttgtt
agaaaaactggaaaagttgatgggatacatttctgtgcttgtattaatgtctgtcccacc
attagggagtgtcatttttgtacatgtacactcatcaccccatctttgtcctgcag
Exon 4
GAGTCAACTCTGCACTTGGTGCTGAGACTGCGAGGCGGTGCCAAGAAAAGGAAGAAGAAG
TCCTACACCACTCCCAAAAAGAACAAGCACAAGAGGAAGAAGGTCAAGCTCGCAGTGCTC
AAATACTACAAG
Intron 4
gtatggctggaaccagcggcagcagaaccgggttctgtttctgcctcaggcctgacttca
gttgttctgcag
Exon 5
GTGGATGAGAACGGGAAAATCCACCGGCTGAGACGCGAGTGTCCCGCTGATGAGTGCGGC
GCCGGCGTGTTCATGGCGAGCCACTTCGACCGGCATTACTGTGGGAAATGCACCCTGACG
TACTGCTTCAACAAACCCGAGGACAAGTAGACAGGGAGGGGGCGGAGCCAATAAAGATGA
AAACTTTGACTTAGA
3' Downstream
tctgtctgtctgtttaatgaagctacaaacatctttatacttttgttgttttgttaaagt
atttacacaggactcctcagaagtaaatctcaacaacctcaatagaagtgttgagagaac
agtaacgggtgatttctaaattacgccaacagcagcactccaggtagaaatgacaaatgc
cccatgacctgcaaaggttacagctgggcataaatgactggaatactttgaaagggagtg
atccaaatgatccaaccaaagtgatgtttaggaagaatcggaacaggagcgtgacaagtt
ttgggtgggaaggtgaaacaaaagaacagatgtttttggtcaaactgtgccattggcacc
aattcatattccatggttatctcaagacaatagggtggatttttctatattaaaaatttg
tcaaattgtataatgctcgtttgattcaagcatacatatctgaacattatgtatcttggg
ttaaagggagagacgggcagcctctgttgtccctgaattcaaagtagatatacaataaat
aattaatataacaatatacattgcagaaataattggctatatttctgaattggattgaga
atgttagaccactgaagtcttcaacccttgtgctaaattagatgaccccacccttacatt
gacgtgttctccctaccatgacaaaggtggaaagatttcatgtaatccatggaaacagtg
aagatcacaaatcattgaagaaaaaaggttcagagcactgtctagtgggtctagatgacc
caaatcccaatgttaaagtgcctaggatggcacaagggtcaatatgctccgattcaagtt
aagaacgatcactgtggcggttttattaatgtaaaaaatgttatttgaactactcaggtg
catgaaacacgtttgtgggcacctgctcatgtggaactaacaggaaattaatctgcagac
aaaaacgctaaaatagcttcagaggaaaatattgatgtat