Species | Oryzias latipes |
Gene Name | Rpl6 |
5' Upstream | tgacctatataatcagatgctttctttgctcagtttacatttatatttagttttataatt
tgaaattaaagtaaatgtttacatcctcagaaaaaacatttacatgatataaagtcattg
ctgtaatttggccctttaggcaatttatttaattatcaattcactataaatatgtagtta
atctaaaaagccattttttgttttagaatttatccattatgttgtggaacagatcttaaa
actacaacgaccagtacatctcaacacgacgcggttacgtcagaatcgagcgtccttata
tgcgtatcatccccggatgtcggtctttttttcatagcaaaggtaagatccccttgcctt
cgtgttactgttggaataaaaatctactttcatctgcctttccgaataaaccatattgca
taaaaccgtcatgatggctgagttttcatctagagagtctgtttggcgatgatattgccg
tgtttaagtcgccagctctttaaaatcagagtcatttatttaatcgggaatcgtaggccg
ctggctagcctccggtcacttcacaacatcaactgtttcatatagaaacgtgcctttgcg
cttgtttcggtactttatagctatatttcacatgtaatggcataaactgataaacttgaa
gtcactgacaatttaagtggctagctggctaatatgaggctggcgccgcagtgctgtgct
aaatgctaactagcataattgtcatgctgccttgcacgggatcggtaagacatgactgta
aatcaagtaattgaaggcaacattcgtactgtgctgcattaactcgcgtctctggcacac
aatggtgtttgttgttctttatgtgcaaatttacttagtttaaagtgtgaatgtttagtc
aagactgtgtgacacgaatggagccatcccagtcccagataaccttatgggtttccatgc
taacataaacattgtatctgctttaatttctaatag |
Exon 1 | ATGGCAGAGGGAGATAAAAAGCCTGCCAAGAAGAAGCACGGTAGCCGGAACCCGGTTCTG
GCCCGGGGTATCGGACGCTACTCCCGGTCTGCTATGTTCGCCCGCAGGGCCATGTACAAA
AGGAAGACCAAGACCACTGAGACCAAG |
Intron 1 | gtgagtccaatcccaccacgcagcccccatagacgcctgtacccaaacatctaagctctg
caccacttcactgaattgttgcag |
Exon 2 | GTGGAGAAGAAGATTAAGATCAAGGAAAGACCTCGAGCCACTGTGGTGAAGACTGTTGGT
GGAGACAAGAATGGAGGCACCCGTGTGGTCAAACTGCGTAAAATG |
Intron 2 | gtaagaggtttatgatgattttgctgtttaatttgctttttcacgtgtctgctgtcaggc
atcttcactaagtctgtatattattagcaactttaaaatcaattatttctttgagatcca
cattggaaattgtccaccaatttgtcagtttataaaaagaatgactgttccctggttact
aaatacgtggggccagtgctgaactttcttcttggtcgcgggacccagaggaaggttacg
gttacagttagggtcaggttaatagcaaccaacaacatatgttgccttgaacgcacttta
aatacttgcaggcaatgcatcagtgtgcatcttgaatggacgtattatgtgtgaccaaga
ggaatttccgtcagtttttgtgcttggttgtatgtaaatgcatgcaaataacatcagcct
aaaggcccgtacacaccgggacgaatattcgccaggcgttattcgccagcgtttttcgcc
acgttttttgtgttcacacccaggcgattttcgctgacgatgagtggagtgaacatgcaa
tttcattccctgacattagatggcgcttaatgtaaaacagaaatactcctgtacacaagg
tggcgctgcgcaactttacgcttctgaaagtcgcttttcactcagaagaagagagcaagt
atttacacgcttgtcagaatcaaacaaagaaaacatgaatatttcaagcaccagtagctc
caactggtgcttggttcggggatattttagaatgtccgtcattattgcttcgcggctgtg
tgtagacgctacttggcgtctatcttcttcgctggtatgtgtgctcagcaaggcagtttt
gtgtttgagcgcccccaagttgtgttttactgtaacttcagaagctccagacacgtgagc
aaaagcgccattctcattggtcgagtagatttcgacgcgacgcgtcgaggaaaaaaaaaa
cgaacccgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnngaacggaaggagatccagaaggaggttgactctaagctcttgcctctca
tcaaaaaagttcctcagctgaaaggatatcttcgctcctccttttacctgacgaatggtg
tctacccacacaagctggttttctaaatgtgttgtaataaagagtaccaccgtctaatgc
agtttcttttattcaatgtcaacgcgcacgaaacactcagcaaaaaagcatctttagttt
taaatgtattcagattgtaaaaaaagaagccctcaatatggggtttgtctgttgcagata
cttaaagtgattagcagacgtcgaaagagatccagggatgtcatgcagccagtttaaccc
ttgtgctatcctacggggtcaagatgaccattgacatgttatccctaccatgataacggc
ggagaggatttcatgtaatccatggacaccagtgtagatcacaaatcattgaagaaaagg
ttcagcgcactgtctagtgggtctagatgacccaactcccaatgtcaaagtgcctaggat
agcacaacggttacagctgcatttactgcagttttgaacctattatacatcctgccagtt
taaatctttagatggttcattccactgaggatgcattttagaacataatctgggaatttg
ctttgtaaaataaggcatttctagatcaagcatatctaattcttagaagtaaaagaatga
ccacagcagacattgagctcagacagcttaagggctatgtttttaattaaaaaaatgaca
cgtctaatgtaacaagacaaaaataaatacaagaatttgatctctttagcatggccacga
gtattatcctcaaaacaacgggtagaaagcagcacggaaaaaggccccttgccaaggaat
gataagtgccttctgttgagtccgccagtactgtacggtcaagtgaggtttttttttggt
aaaaaaaaacaaaccaaaaactccttcctcagccagacttgaacagcagaatggccacct
gacccaagtagaagtaaatgaaatgcttggtctcgtgagtcacgtagctgccgaagttcc
tcccaacaatgcagtgccaagtcgggttgtatttcttgtcgaactcctgtggaagagaaa
gacggattctgattatggagaaaacatcccaaatgtccgggtaacttcacatgcaaggtc
aaattgtggtggagaatgctgattagattgaagatgggaagcaattataaacagtatgtt
ttcaattattttagctgtccataatagactacatatggtgcggtattaccaactattcca
gagtcacagatggtgatttacaagatttttgcaccggttttcctccaaattatcttcaaa
aattttttttaaaataattctgacatttcgctatttgaaatgaagcatgacttgttaatc
aggagatgaacacgttgtacattaatgtacatatttccataaacttgactttttgaacct
gttaatctagtttttttgagtcttggtgttgagttttgggtaccacattttgagagtaat
aaatgacagattgtnnnnnnnnnnttaacgcctggcgttttttcgcgtcggtgtgcacac
tctcgttggtgccctttgtttagtcacgaggcgttaaacgtcggcgaaaatcgccggcga
aattcgtcccggtgtgaacaggcctttacaataaaacgtacttgttttttatttctgtgt
ttaccaaatgagaaatggccaatgtatttgccataatattatgtctttgtgtagtattaa
tagtgaataaaatatccaacattgtactcgacccactctaatggcaaatcgtgtttttgg
tgtaaacatgttcttggggggatttttggaggacttgtaaaaggaaatggagattaaaac
tgcatttctgtggattaatttaatcattgttgtgaatcaggagcagaagaaaaaatacag
ttggcgcagtggcgtaggagctacaaggagtgggccacaagctccccgctctgctccatt
ctgatgcatccccttgtagacgactagatgcatgcacgtcttcatttttcccgttttggc
atcaaagctgtacaactcggtagctttaatattgctcaccgcttttgttgcactgttgat
gttaatgttgagttatgagaggctgtaagggagcgggagagagacgcctttttcatatta
aattgctgctactgagttatgatttgaataaagaaattcagtaatcagaaatgcaatttt
caacttaatcttcttaatgtgtccttcatgagaaaagtgccacataaacatgttaaaaac
accaaaaacacaatttttattggagcaggtctttaaggtttgttaaagttataattatca
gaggaccctgtatggagatagttggtttacttctaaaaatgcaaagtataacaatagcaa
aattaatttaactcattttctttatgattaaaaacttgagatatttgttgccaatttgaa
gatttttccaactggtaaaagatcaattctgacaaaaatcatagacactgccatagattt
atttcaagctattagaacgagcatttatcaaatacaaatatatcattactgagaaacgaa
caagtgtttgggttctcatgttgtacagattttaacaaaataaccctataaaaaccgtcc
cactgcttatacactttttattttactcgatggtcaaatgtgtgatctgtttggggggac
tatgctccatattttgatggccttgtctgcgccttaaagtcaatgttgttgtgcgtgtag
|
Exon 3 | CCTCGCTACTATCCCACAGAGGACGTGCCCCGCAAGCTGAAGAGCCACGGGAAGAAGCCC
TTCTGCCAGCACAAGAGGAAGCTGCGCGCCTCCATCACACCCGGAACCGTGCTCATTCTG
CTCACCGGCCGCCACCGCGGAAAG |
Intron 3 | gtaagaaccgccgttttatctgatccgaacgcactcccagagcaaaatgaccgaggtggt
gcacgttgaaagttattggaattggatatcgctgtgccaccaaagcactaataattcaag
agcggatacaggagcctggcatctgcattaaggcagataattttcattcagcatattcag
tgggcaaatgatcgtttttattgacaggaatgtttgtttggttcaaatttaagtgagttt
ttcctattaataattattttaaaattccagtaataatagcttttggatttttgttaaaac
agttaaaaaccttctagaattcatatgcttttctggtcaagaatttaattatattgatta
ttattattatgtgaaatgatcataacatacttcaggaacactggcttaccttgtttttat
tttacatttgtgatgattattaattgtgacttgtggtattattcttatgtgataaggcag
actgtatggaaggcctaaatttattccacaaatcattgatctacacaaattaagaataaa
tttagaataaatctccactccggcagattcttgtctcctccccaagaaaatattctgtgg
aacaatagtacagaactcctgtgtgatccactccactgccagagacattgtccttctctc
ccactcacatgctgcactgcaagtaaaagaagcaagcatgcccacacacagtttgagctg
cagttgacctatataatgtctaattgacaaactgaaaacctgttctgttacatcaagcat
tttttaagtataattagctgactgtaaatccaagtcaaatagtttttaaatggagtgatg
gagtgttttcatgaaaaacagcttgtgtgagtctttgatgtgaaatttagccaattcatc
aaaattctgtttttttttcag |
Exon 4 | CGTGTGGTGTTCCTGAAGCAGCTTTCCAGTGGTCTTCTGCTTGTCACTG |
Intron 4 | gtgaggaagaaagaagacttaaagagaattgatttcatgaagaagttttgtggtcattta
tgcttttcccttccttttttctgttag |
Exon 5 | GCCCTCTAGCCTTGAACAGAGTCCCCCTGCGCAGGGCACACCAGAAGTTTGTTATTGCCA
CCAACACCAAAGTTGACATCACTGGCATGAAGATCCCCAAAACCCTCAACGATGCGTACT
TCAAGAAGAAGAAGCTGAGGAGACCCCGGCACCAAGAGGGAGAGATCTTTGATACAGAAA
AAGAG |
Intron 5 | gtaacgaatggaaaattctcctttcaagtctgatttcaggaacaaatgatttgaccaccc
cctttttttttggtcttgtgttcag |
Exon 6 | AAATACCAGCTGACAGAGGAACGGAAGGAGATCCAGAAGGAGGTTGACTCTAAGCTCCTG
CCTCTCATCAAAAAAGTTCCTCAGCTGAAAGGATATCTTCGCTCCTCCTTTTACCTGACG
AATGGTGTCTACCCACACAAGCTGGTTTTCTAAATGTGT |
3' Downstream | tgtaataaagagtaccaccgtctaatgcagtttcttttattcaatgtcaacgcgcacgaa
acactcagcaaaaaagcatctttagttttaaatgtattcagattgtaaaaaaagaagccc
tcaatatggggtttgtctgttgcagatacttaaagtgattagcagacgtcgaaagagatc
cagggatgtcatgcagccagtttaacccttgtgctatcctacggggtcaagatgaccatt
gacatgttatccctaccatgataacggcggagaggatttcatgtaatccatggacaccag
tgtagatcacaaatcattgaagaaaaggttcagcgcactgtctagtgggtctagatgacc
caactcccaatgtcaaagtgcctaggatagcacaacggttacagctgcatttactgcagt
tttgaacctattatacatcctgccagtttaaatctttagatggttcattccactgaggat
gcattttagaacataatctgggaatttgctttgtaaaataaggcatttctagatcaagca
tatctaattcttagaagtaaaagaatgaccacagcagacattgagctcagacagcttaag
ggctatgtttttaattaaaaaaatgacacgtctaatgtaacaagacaaaaataaatacaa
gaatttgatctctttagcatggccacgagtattatcctcaaaacaacgggtagaaagcag
cacggaaaaaggccccttgccaaggaatgataagtgccttctgttgagtccgccagtact
gtacggtcaagtgaggtttttttttggtaaaaaaaaacaaaccaaaaactccttcctcag
ccagacttgaacagcagaatggccacctgacccaagtagaagtaaatgaaatgcttggtc
tcgtgagtcacgtagctgccgaagttcctcccaacaatgcagtgccaagtcgggttgtat
ttcttgtcgaactcctgtggaagagaaagacggattctga |