Species | Stagonospora nodorum |
Gene Name | Rpl18a |
5' Upstream | tctagcttgtgccaaatgctcgtcctgccttgatcgcaatcttccggaggtggttcgccg
tgaagtatagtgtgaaaatagcccaggctggcagcgccccgtttgagatgtgcttgatga
agctgctggtcaagtctttccaggcatcatacacggcaagaaattgacgatctgtgagcc
tgccctggtttgttgcttcatcggtgagaatgatttgcttgactccgcgccagtaggcgg
cgatgatatctatccatgcatcaccctctttctgtcccatgcgagtcttcttgttgtact
tgagcgcatagcgtatgtcgccaacgatcttatcgtcgttcgatgcgcggtagaactcgt
acagccgtcctggatcgtttgggggtggcactggactgaggaattcagcgacaggttgcg
ccaggcccgtcgcataggcgtcctcgaactgcaccagtgcggcttgcatggctgctgtcc
agctctacacaggatggcaagtatatgggaccgggaagtcgcaataggtgaatgatgcgt
agtgactatgtcgactgattgcaatccatgtacgtctttgctatttcacgttcaacagca
taaagacgttgagtgttatggtgttgaagctcggattgcgtcggtgtttgggcggtttgc
acgccgatgtgggtcgcggcgcccgccaagcgctgatttgctgctggcgttagcgcgagc
acaagcgagaagcccacgaaggtgtcgttggactttcgacttttgaccatcacgacaaca
cgggtactaaccgacagcacaaataaggtcagtcaatatttttacaacatctgtgaacac
tgctaacattgtctagatgggtaagcatcctctcttctccgcactctctctccgtccagc
aattgcagccaagtgaaatgccgtaaacgcaccgcatgcgccgcaaaaatacgacatcga
ccttccggcacacacgcaagttacgaaggagcaggccacaatgattggga |
Exon 1 | ATGG |
Intron 1 | gttgatttcgcggcatccggtctcgactgtgtgcctgctgtggggagatggtggatgagc
aaccggacaacttttgcacgacagacatatcacgacccggactattatcacgcccaacct
tgaacgaaaacgaacaagccggaattagctgctgcaattgctgggctgaatgtcatatac
gaagggcagccgtactgacgtctgttag |
Exon 2 | CTCGCTTCTCCGAATACCAGATCATCGGGCGCCATCTGCCCTCAGAGGCCAACCCCACCC
CCAAGATCTACCGTATGCGCATTTTTGCGCCCAACGAGGTCGTCGCTAAGTCACGGTTCT
GGTACTTCCTCGGCAAGCTCCGAAAGATTAAGAAGGCGAACGGCGAGATCGTCTCCGTCA
ACCAG |
Intron 2 | gtgcgtgccacacacggcgcacgatacagatgtgtctgcaccgatggcaagaggagcggg
aatactaacgtttgctag |
Exon 3 | ATCCACGAGAAGCGCCCCCAGAAGGTCAAGAACTTCGGTATCTGGATCCGCTACGACTCC
CGCTCCGGCACTCACAACATGTACAAGGAGTACCGTGAGATGTCCCGTGTTGCCGCCGTC
GATGCTCTTTACCAAGATATGGCCGCCCGTCACCGATCTCGCTTCAGGCAGGTTCAG |
Intron 3 | gtatgttgcatgcaccatccagtgacgcgcaaccatctaatcctatgtag |
Exon 4 | ATCCTCAAGGTTGTTGAGATCGAGAAGAGCGACGACGTCCGCCGCCCATACATCAAGCAG
CTCCTCGTCAAGGGCCTCAAGTTCCCTCTGCCCCACCGCATCAACAAGAAGGCCGGCAAG
AAGGTCTTCGCTGCCAAGCGCCCATCAACTTTCTTCTAAGCGTCTTTCTCTTTCCGGAGT
GCGGTCTGGATGGGCAGGGATCATATGGGTTTCCCTCGGTTATGCATGCTTCACGAAAAG
AAGTACATTAGGAACGAATGAAAATCCATGATACCTCCAAA |
3' Downstream | tgacctaacgcattgcgcacgtcattgctctcggtgaacactcgtgggctcaagacgaag
aatgaaagcaacatgcttccagtacattgtatcctgatatgaccactaatatatctagat
tttagctctcctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccaccat
gggtatccagacaccttggtgttgtccagcgtccctgtgaacttcgctggccttttctgt
aagaacgactgcactccctcggtgttatcactacacgttgttagcgcttgcaatcattcg
gggcttcgaccacttacggcgatccaaagagctcatagatgaccctgctgtctagcaaat
gctgtgcctccggattccccgcatctctgtacatgagctccttcatgagatatgtcgata
cactgcttgtgttcttgaccacatcctcagcaacctcgagtgccttcggaagcacatctt
caggcttgtccactagctcgctgaacaggccgtcccagaccttgtcgctcgccaggtatg
tcgcacctgttgtaacggccttcatcgcacgactgtgtccgacaagtcgtggaaggaaga
aggacgaacacgcttccatgatgaggccgcggcgcgagaacacaaagccaatcttcgcat
ccttgtacgcgatacggatgttcatgggcagcgtcattgtgatgccgattccaacagcac
taccctgcaaggcgccgatggtaggcttgcgacagtggaatatcgagagtgttactcggc
ccccgctatcaccttttatcagcatggctatccatata |